BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB006C09LP1|AL425506
(973 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1012 1898 0.0
>3x_Contig1012
Length = 3540
Score = 1898 bits (956), Expect = 0.0
Identities = 966/971 (99%)
Strand = Plus / Plus
Query: 1 gatctcgaatgavacttactctagaattatgggtttcgttgctggtgtgttcagtggtgt 60
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2169 gatctcgaatgaaacttactctagaattatgggtttcgttgctggtgtgttcagtggtgt 2228
Query: 61 tgctaagaatgcagtggggcatccattcgataccattaaggtgcggttacaaacttcaca 120
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2229 tgctaagaatgcagttgggcatccattcgataccattaaggtgcggttacaaacttcaca 2288
Query: 121 aaatgaaactagattcaaaggacctttagattgtgtgtacaagacgttcagaaaccaagg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2289 aaatgaaactagattcaaaggacctttagattgtgtgtacaagacgttcagaaaccaagg 2348
Query: 181 tataagagggttctatcttggatttacaccaccattggtaggctggatcttaatggattc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2349 tataagagggttctatcttggatttacaccaccattggtaggctggatcttaatggattc 2408
Query: 241 tgttatgttaggatgcttgcataactacagaatgttaatgcataaatatgtttatccaaa 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2409 tgttatgttaggatgcttgcataactacagaatgttaatgcataaatatgtttatccaaa 2468
Query: 301 tgacgagaaacttcccttgagtgggtgtattataagtggtgtgttagcaggctggtctgt 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2469 tgacgagaaacttcccttgagtgggtgtattataagtggtgtgttagcaggctggtctgt 2528
Query: 361 ttcatttatagcaccaccaattgaattggcaaaggcaaaattacaagttcaatatgataa 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2529 ttcatttatagcaccaccaattgaattggcaaaggcaaaattacaagttcaatatgataa 2588
Query: 421 aactactaccagatacaaaggaccattggatgtgatcaaaaagatttattctgctcaagg 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2589 aactactaccagatacaaaggaccattggatgtgatcaaaaagatttattctgctcaagg 2648
Query: 481 tatcagagggctctataaaggtctaatttcaacattgatctttagaacacatttcgttta 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2649 tatcagagggctctataaaggtctaatttcaacattgatctttagaacacatttcgttta 2708
Query: 541 ctggtggggatcatacgaattactaacaaggtggttcagagagaatacaaaaatgagtga 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2709 ctggtggggatcatacgaattactaacaaggtggttcagagagaatacaaaaatgagtga 2768
Query: 601 agctgctattaatttctgggccggtggttttagtgcctcgttcggtttctggaccactgc 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2769 agctgctattaatttctgggccggtggttttagtgcctcgttcggtttctggaccactgc 2828
Query: 661 ctacccaagtgatgttgtcaagcaagttgttttatgcaatgacaagtacgacggttcttt 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2829 ctacccaagtgatgttgtcaagcaagttgttttatgcaatgacaagtacgacggttcttt 2888
Query: 721 caaatcgtggagaactgccgtcaaagacatttatcaatcaaagggtatcaatggattctt 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2889 caaatcgtggagaactgccgtcaaagacatttatcaatcaaagggtatcaatggattctt 2948
Query: 781 caaaggttttgtgccaagtttcctaagaagtttccctgcaaatgcggctgccctagcagc 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2949 caaaggttttgtgccaagtttcctaagaagtttccctgcaaatgcggctgccctagcagc 3008
Query: 841 ttttgaatttgttctaagaacttcaggtgcaaaatcttagctataaataatagtataagg 900
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3009 ctttgaatttgttctaagaacttcaggtgcaaaatcttagctataaataatagtataagg 3068
Query: 901 natattcaagaaaagcttttagtttgttgtwcagttactctactattattgttctcgtca 960
||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 3069 aatattcaagaaaagcttttagtttgttgtacagttactctactattattgttctcgtca 3128
Query: 961 agatgaaggta 971
|||||||||||
Sbjct: 3129 agatgaaggta 3139
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 7211
Number of Sequences: 1807
Number of extensions: 7211
Number of successful extensions: 29
Number of sequences better than 1.0e-20: 1
length of query: 973
length of database: 10,358,551
effective HSP length: 16
effective length of query: 957
effective length of database: 10,329,639
effective search space: 9885464523
effective search space used: 9885464523
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.7 bits)